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Fluorescence Microscopy

Fluorescence is one of the most commonly used physical phenomena in biological and analytical microscopy, mainly because of its high sensitivity and high specificity. Fluorescence is a form of luminescence.

Fluorescence microscopy even allows users to determine the distribution of a single molecule species, its amount and its localization inside a cell. Colocalization and interaction studies can be performed, and ion concentrations as well as intra- and intercellular processes like endocytosis and exocytosis can be observed.

With the help of super-resolution fluorescence microscopy, it is even possible to image sub-resolution structures.

Read more about fluorescence microscopy, quantitative fluorescence and super-resolution on Leica Science Lab.

Simply get in touch!

Our experts on solutions for fluorescence applications are happy to help you with their advice.


Fluorescence Light Microscopes

Fluorescence microscopes used in research applications are based on a set of optical filters:

  • an excitation filter
  • a dichroic beam splitter and
  • an emission filter

The filters are often plugged in together in a filter cube (compound microscopes) or in a flat holder (mainly stereo microscopes).

Whereas the excitation filter selects the wavelengths to excite a particular dye within the specimen, the emission filter serves as a kind of quality control by letting only the wavelengths of interest emitted by the fluorophore pass through. The dichroic mirror's purpose is to reflect light in the excitation band and transmit light in the emission band,  enabling the classic epifluorescence incident light illumination.

This fluorescence tutorial explains the optical elements in the light path and the operating mode of fluorescence microscopy taking the example of an inverted microscope which can be used for transmitted light contrasting methods and fluorescence microscopy.

Microscope Software LAS X
Microscope Software LAS X
Fluorescence Stereomicroscopes Leica M165 FC & M205 FA
Fluorescence Stereomicroscopes

Fluorescence Stereo Microscopes

Leica Microsystems’ fluorescence stereo microscopes use the TripleBeam technology, a separate (third) beam path for fluorescence illumination of the sample without a dichroic mirror.

Therefore one excitation filter for the illumination beam path and two emission filters, one for each observation beam path, are needed.

Leica Microsystems FluoScout – Get the Most out of Your Fluorescence Microscope

To achieve excellent imaging results in fluorescence microscopy, the light source, fluorophores and filter cubes have to match each other perfectly. FluoScout enables you to choose the right filter cube and filter set for maximizing the excitation and emission efficiency of your fluorescent dyes or fluorescent proteins.

  • Choose light source, fluorophores and filter cube separately.
  • Get a recommendation of filter cubes based on the choice of fluorophores.
  • Collect spectra by one click in the quotation cart and get offers for your filter sets.

Start FluoScout

Leica Microsystems FluoScout™: Find the best filter cube for your needs

Leica FluoScout™: Adding fluorophores

Absorbing data, emitting beauty

To acquire fluorescence images, it is necessary to use the appropriate CCD or sCMOS fluorescence camera. Leica Microsystems offers dedicated fluorescence cameras for all application needs. Each camera provides the perfect match of sensitivity and image quality to ensure superb results.


Absorbing complexity, emitting simplicity

Straightforward setup and control of experiments is becoming more and more important In fluorescence microscopy. The dedicated Leica Application Suite (LAS) X software platform facilitates the setup of even complex experiments. LAS X guides you from the setup to the analysis of the imaging data. From easy multi-channel experiments to complex 3D analysis, LAS X is the perfect software platform.