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Publications 2018

Regulation of Neuroregeneration by Long Noncoding RNAs
Perry R, Hezroni H, Goldrich M, Ulitsky I
Molecular Cell
2018 vol: 72 (3) pp: 553-567.e5

A preliminary study of oxidant stimulation for enhancing coal seam permeability: Effects of sodium hypochlorite oxidation on subbituminous and bituminous Australian coals
Jing Z, Mahoney S, Rodrigues S, Balucan R, Underschultz J, et. al.
International Journal of Coal Geology
2018 vol: 200 pp: 36-44

Multiplexed, high-throughput measurements of cell contraction and endothelial barrier function
Rokhzan R, Ghosh C, Schaible N, Notbohm J, Yoshie H, et. al.
Laboratory Investigation
2018 pp: 1

Retinoic acid signaling is essential for airway smooth muscle homeostasis
Chen F, Shao F, Hinds A, Yao S, Ram-Mohan S, et. al.
JCI Insight
2018 vol: 3 (16)

Patterned Nanobrush Nature Mimics with Unprecedented Water-Harvesting Efficiency
Sarkar D, Mahapatra A, Som A, Kumar R, Nagar A, et. al.
Advanced Materials Interfaces
2018 vol: 5 (19) pp: 1800667

Immune checkpoints indoleamine 2,3-dioxygenase 1 and programmed death-ligand 1 in oral mucosal dysplasia
Sieviläinen M, Passador-Santos F, Almahmoudi R, Christopher S, Siponen M, et. al.
Journal of Oral Pathology & Medicine
2018 vol: 47 (8) pp: 773-780

A new Aura virus isolate in Brazil shows segment duplication in the variable region of the nsP3 gene
Mosimann A, de Siqueira M, Ceole L, Nunes Duarte dos Santos C
Parasites & Vectors
2018 vol: 11 (1) pp: 321

miR-181c-BRK1 axis plays a key role in actin cytoskeleton-dependent T cell function
Lim S, Ioannou N, Ramsay A, Darling D, Gäken J, et. al.
Journal of Leukocyte Biology
2018 vol: 103 (5) pp: 855-866

A rapid and concise setup for the fast screening of FRET pairs using bioorthogonalized fluorescent dyes
Petrovics R, Söveges B, Egyed A, Knorr G, Kormos A, et. al.
Organic & Biomolecular Chemistry
2018 vol: 16 (16) pp: 2997-3005

Outer membrane vesicles facilitate trafficking of the hydrophobic signaling molecule CAI-1 between Vibrio harveyi cells
Brameyer S, Plener L, Müller A, Klingl A, Wanner G, et. al.
Journal of bacteriology
2018 vol: 200 (15) pp: e00740-17

Developmental dynamics of gene expression and alternative polyadenylation in the Caenorhabditis elegans germline
West S, Mecenas D, Gutwein M, Aristizábal-Corrales D, Piano F, et. al.
Genome Biology
2018 vol: 19 (1) pp: 8

Nanoparticle–Cell Interactions: Surface Chemistry Effects on the Cellular Uptake of Biocompatible Block Copolymer Assemblies
de Castro C, Ribeiro C, Alavarse A, Albuquerque L, da Silva M, et. al.
2018 vol: 34 (5) pp: 2180-2188

Publications 2017

High-quality human preimplantation embryos actively influence endometrial stromal cell migration
Berkhout R, Lambalk C, Huirne J, Mijatovic V, Repping S, et. al.
Journal of Assisted Reproduction and Genetics
2017 pp: 1-9

Sweet Vector for Gene Delivery: the Sugar Decoration of Polyplexes Reduces Cytotoxicity with a Balanced Effect on Gene Expression
Albuquerque L, Alavarse A, Carlan da Silva M, Zilse M, Barth M, et. al.
Macromolecular Bioscience
2017 pp: 1700299

Drosophila MIC60/mitofilin conducts dual roles in mitochondrial motility and crista structure
Tsai P, Papakyrikos A, Hsieh C, Wang X
Molecular biology of the cell
2017 vol: 28 (24) pp: 3471-3479

Identification of GPC2 as an Oncoprotein and Candidate Immunotherapeutic Target in High-Risk Neuroblastoma
Bosse K, Raman P, Zhu Z, Lane M, Martinez D, et. al.
Cancer cell
2017 vol: 32 (3) pp: 295-309.e12

PTHrP is essential for normal morphogenetic and functional development of the murine placenta
Duval C, Dilworth M, Tunster S, Kimber S, Glazier J
Developmental Biology
2017 vol: 430 (2) pp: 325-336

Treatment of Cancer In Vitro Using Radiation and High Frequency Bursts of Sub-Microsecond Electrical Pulses
Sano M, Volotskova O, Xing L
IEEE Transactions on Biomedical Engineering
2017 pp: 1-1

The effect of rank, lithotype and roughness on contact angle measurements in coal cleats
Mahoney S, Rufford T, Johnson D, Dmyterko A, Rodrigues S, et. al.
International Journal of Coal Geology
2017 vol: 179 pp: 302-315

Oscillation of an isolated liquid plug inside a dry capillary
Srinivasan V, Kumar S, Asfer M, Khandekar S
Heat and Mass Transfer
pp: 1-10

Tolerance development in Listeria monocytogenes-Escherichia coli dual-species biofilms after sublethal exposures to pronase-benzalkonium chloride combined treatments
Rodríguez-López P, Cabo M
Food Microbiology
2017 vol: 67 pp: 58-66

Photodithazine photodynamic effect on viability of 9L/lacZ gliosarcoma cell line
Fontana L, Pinto J, Pereira A, Soares C, Raniero L, et. al.
Lasers in Medical Science
2017 vol: 32 (6) pp: 1245-1252

Prolonged circulation and increased tumor accumulation of liposomal vincristine in a mouse model of rhabdomyosarcoma
Roveri M, Pfohl A, Jaaks P, Alijaj N, Leroux J, et. al.
2017 vol: 12 (10) pp: 1135-1151

Retention of ferrofluid aggregates at the target site during magnetic drug targeting
Asfer M, Saroj S, Panigrahi P
Journal of Magnetism and Magnetic Materials
2017 vol: 436 pp: 47-56

Live Imaging Mitochondrial Transport in Neurons
Course M, Hsieh C, Tsai P, Codding-Bui J, Shaltouki A, et. al.
Publisher: Humana Press, New York, NY
2017 pp: 49-66

Redirecting N-acetylaspartate metabolism in the central nervous system normalizes myelination and rescues Canavan disease
Zhang N, King J, Zhang N, Zhang N, Wilson J, et. al.
J Neurosci Methods
2017 vol: 189 (2) pp: 186-196

Whole flaxseed diet alters estrogen metabolism to promote 2-methoxtestradiol-induced apoptosis in hen ovarian cancer
Dikshit A, Hales K, Hales D
The Journal of Nutritional Biochemistry
2017 vol: 42 pp: 117-125

Decreasing amyloid toxicity through an increased rate of aggregation
Sonzini S, Stanyon H, Scherman O, Rauk A, Haass C, et. al.
Phys. Chem. Chem. Phys.
2017 vol: 19 (2) pp: 1458-1465

Removal of Listeria monocytogenes dual-species biofilms using combined enzyme-benzalkonium chloride treatments
Rodríguez-López P, Carballo-Justo A, Draper L, Cabo M
2017 vol: 33 (1) pp: 45-58

Publications 2016

Wortmannin-induced vacuole fusion enhances amyloplast dynamics in Arabidopsis zigzag1 hypocotyls
Alvarez A, Han S, Toyota M, Brillada C, Zheng J, et. al.
Journal of Experimental Botany
2016 vol: 67 (22) pp: 6459-6472

Non-SMC Element 2 (NSMCE2) of the SMC5/6 Complex Helps to Resolve Topological Stress
Verver D, Zheng Y, Speijer D, Hoebe R, Dekker H, et. al.
International Journal of Molecular Sciences
2016 vol: 17 (12) pp: 1782

Investigating Alternative Transport of Integral Plasma Membrane Proteins from the ER to the Golgi: Lessons from the Cystic Fibrosis Transmembrane Conductance Regulator (CFTR)
Amaral M, Farinha C, Matos P, Botelho H
Unconventional Protein Secretion
2016 pp: 105-126

Dicer generates a regulatory microRNA network in smooth muscle cells that limits neointima formation during vascular repair
Zahedi F, Nazari-Jahantigh M, Zhou Z, Subramanian P, Wei Y, et. al.
Cellular and Molecular Life Sciences
2016 pp: 1-14

Role of paclitaxel on critical nucleation concentration of tubulin and its effects thereof
Verma S, Kumar N, Verma V
Biochemical and Biophysical Research Communications

Docosahexaenoic Acid Conjugation Enhances Distribution and Safety of siRNA upon Local Administration in Mouse Brain
Nikan M, Osborn M, Coles A, Godinho B, Hall L, et. al.
Molecular Therapy—Nucleic Acids
2016 vol: 5 (8) pp: e344

A structurally self-assembled peptide nano-architecture by one-step electrospinning
Gharaei R, Tronci G, Davies R, Gough C, Alazragi R, et. al.
J. Mater. Chem. B
2016 vol: 4 (32) pp: 5475-5485

β-arrestin-biased signaling through the β2-adrenergic receptor promotes cardiomyocyte contraction
Carr R, Schilling J, Song J, Carter R, Du Y, et. al.
Proceedings of the National Academy of Sciences of the United States of America
2016 vol: 113 (28) pp: E4107-16

The impact of doped silicon quantum dots on human osteoblasts
Ostrovska L, Broz A, Fucikova A, Belinova T, Sugimoto, H et. al.
RSC Adv.
2016 vol: 6 (68) pp: 63403-63413

Morphine Modulates Adult Neurogenesis and Contextual Memory by Impeding the Maturation of Neural Progenitors
Zhang, Yue;  Xu, Chi;  Zheng, Hui;  Loh, Horace H.;  Law, Ping-Yee (2016)
PLOS ONE vol. 11 (4) p. e0153628

Multiple myeloma–derived MMP-13 mediates osteoclast fusogenesis and osteolytic disease
Fu, Jing;  Li, Shirong;  Feng, Rentian;  Ma, Huihui;  Sabeh, Farideh et al. (2016)
The Journal of Clinical Investigation vol. 126 (5)

Cutting off the power: inhibition of leukemia cell growth by pausing basal ATP release and P2X receptor signaling?
Ledderose, Carola;  Woehrle, Tobias;  Ledderose, Stephan;  Strasser, Katharina;  Seist, Richard et al. (2016)
Purinergic signalling

Thioridazine inhibits gene expression control of the cell wall signaling pathway (CWI) in the human pathogenic fungus Paracoccidioides brasiliensis
Jabes, Daniela Leite;  de Freitas Oliveira, Ana Claudia;  Alencar, Valquíria Campos;  Menegidio, Fabiano Bezerra;  Reno, Débora Liliane Souza et al. (2016)
Molecular genetics and genomics : MGG

Flaxseed and its components differentially affect estrogen targets in pre-neoplastic hen ovaries
Dikshit, Anushka;  Gao, Chunqi;  Small, Carrie;  Hales, Karen;  Hales, Dale Buchanan (2016)
The Journal of Steroid Biochemistry and Molecular Biology vol. 159 p. 73-85

Visual input to the mouse lateral posterior and posterior thalamic nuclei: photoreceptive origins and retinotopic order
Allen, Annette E;  Procyk, Christopher A;  Howarth, Michael;  Walmsley, Lauren;  Brown, Timothy M (2016)
The Journal of physiology vol. 594 (7) p. 1911-29

Biocompatible stimuli-responsive nanogels for controlled antitumor drug delivery
Aguirre, Garbiñe;  Villar-Alvarez, Eva;  González, Adrián;  Ramos, Jose;  Taboada, Pablo et al. (2016)
Journal of Polymer Science Part A: Polymer Chemistry

Findings questioning the involvement of Sigma-1 receptor in the uptake of anisamide-decorated particles
Dasargyri, Athanasia;  Hervella, Pablo;  Christiansen, Ailsa;  Proulx, Steven T.;  Detmar, Michael et al. (2016)
Journal of Controlled Release vol. 224 p. 229-238

Tet-on, or Tet-off, that is the question: Advanced conditional gene expression in Aspergillus
Wanka, Franziska;  Cairns, Timothy;  Boecker, Simon;  Berens, Christian;  Happel, Anna et al. (2016)
Fungal Genetics and Biology vol. 89 p. 72-83

Publications 2015

The Effect of Rank and Lithotype on Coal Wettability and its Application to Coal Relative Permeability Models
Mahoney, Shilo A.;  Rufford, Thomas E.;  Dmyterko, Anastasia S. K.;  Rudolph, Victor;  Steel, Karen M. (2015)
SPE Asia Pacific Unconventional Resources Conference and Exhibition

Gene-Specific Translation Regulation Mediated by the Hormone-Signaling Molecule EIN2
Merchante, Catharina;  Brumos, Javier;  Yun, Jeonga;  Hu, Qiwen;  Spencer, Kristina R. et al. (2015)
Cell vol. 163 (3) p. 684-697

Intermediate Tyrosyl Radical and Amyloid Structure in Peroxide-Activated Cytoglobin
Ferreira, Juliana C.;  Marcondes, Marcelo F.;  Icimoto, Marcelo Y.;  Cardoso, Thyago H. S.;  Tofanello, Aryane et al. (2015)
PLOS ONE vol. 10 (8) p. e0136554

Mitochondrial Dysfunction, Depleted Purinergic Signaling, and Defective T Cell Vigilance and Immune Defense
Ledderose C Bao Y Ledderose S Woehrle T Heinisch M Yip L Zhang J Robson S Shapiro N Junger W (2015)
Journal of Infectious Diseases pp: jiv373

A novel image-based quantitative method for the characterization of NETosis
Zhao, Wenpu;  Fogg, Darin K.;  Kaplan, Mariana J. (2015)
Journal of Immunological Methods vol. 423 p. 104-110

Listeria monocytogenes-carrying consortia in food industry. Composition, subtyping and numerical characterisation of mono-species biofilm dynamics on stainless steel
Rodríguez-López, Pedro;  Saá-Ibusquiza, Paula;  Mosquera-Fernández, Maruxa;  López-Cabo, Marta (2015)
International Journal of Food Microbiology vol. 206 p. 84-95

Thiosemicarbazone p-Substituted Acetophenone Derivatives Promote the Loss of Mitochondrial Δ ψ , GSH Depletion, and Death in K562 Cells
Pessoto F Yokomizo C Prieto T Fernandes C Silva A Kaiser C Basso E Nantes I (2015)
Oxidative Medicine and Cellular Longevity vol: 2015 pp: 1-15

Effects of Trichlorotelluro-dypnones on Mitochondrial Bioenergetics and Their Relationship to the Reactivity with Protein Thiols
Yokomizo, César H.;  Pessoto, Felipe S.;  Prieto, Tatiana;  Cunha, Rodrigo L. O. R.;  Nantes, Iseli L. (2015)
Chem. Res. Toxicol. vol. 28 (6) p. 1167-1175

Creation of microchannels in Bowen Basin coals using UV laser and reactive ion etching
Mahoney, Shilo A.;  Rufford, Thomas E.;  Rudolph, Victor;  Liu, Kai-Yu;  Rodrigues, Sandra et al. (2015)
International Journal of Coal Geology vol. 144 p. 48-57

Cytotoxicity of phenothiazine derivatives associated with mitochondrial dysfunction: A structure-activity investigation
de Faria, Priscila A.;  Bettanin, Fernanda;  Cunha, Rodrigo L.O.R.;  Paredes-Gamero, Edgar J.;  Homem-de-Mello, Paula et al. (2015)
Toxicology    vol. 330 p. 44-54

The in vitro generation of lung and airway progenitor cells from human pluripotent stem cells
Huang, Sarah X L;  Green, Michael D;  de Carvalho, Ana Toste;  Mumau, Melanie;  Chen, Ya-Wen et al. (2015)
Nature Publishing Group vol. 10 (3) p. 413-425

Publications 2014

PINK1-mediated Phosphorylation of Miro Inhibits Synaptic Growth and Protects Dopaminergic Neurons in Drosophila
Pei-I Tsai, Meredith M Course, Jonathan R Lovas, Chung-Han Hsieh, Milos Babic, Konrad E Zinsmaier, Xinnan Wang (2014)
Scientific reports 4 p. 6962

Uncovering molecular events associated with the chemosuppressive effects of flaxseed: a microarray analysis of the laying hen model of ovarian cancer
Karen H Hales, Sheree C Speckman, Nawneet K Kurrey, Dale B Hales (2014)
BMC genomics 15 (1) p. 709

Reduced Inflammatory Phenotype in Microglia Derived from Neonatal Rat Spinal Cord versus Brain
Sam Joshva Baskar Jesudasan, Kathryn G Todd, Ian R Winship (2014)
PloS one 9 (6) p. e99443

The SMC5/6 Complex Is Involved in Crucial Processes During Human Spermatogenesis
Dideke E Verver, Nathalia S M Langedijk, Philip W Jordan, Sjoerd Repping, Geert Hamer (2014)
Biology of reproduction p. biolreprod.114.118596-

MicroRNA-126-5p promotes endothelial proliferation and limits atherosclerosis by suppressing Dlk1
Andreas Schober, Maliheh Nazari-Jahantigh, Yuanyuan Wei, Kiril Bidzhekov, Felix Gremse, Jochen Grommes, Remco T A Megens, Kathrin Heyll, Heidi Noels, Michael Hristov, Shusheng Wang, Fabian Kiessling, Eric N Olson, Christian Weber (2014)
Nature medicine advance on

Dynamic mass redistribution analysis of endogenous β-adrenergic receptor signaling in neonatal rat cardiac fibroblasts
Rhonda L. Carter, Laurel A. Grisanti, Justine E. Yu, Ashley A. Repas, Meryl Woodall, Jessica Ibetti, Walter J. Koch, Marlene A. Jacobson, Douglas G. Tilley (2014)
Pharmacology Research & Perspectives 2 (1)

Fgf10-positive cells represent a progenitor cell population during lung development and postnatally
Elie El Agha, Susanne Herold, Denise Al Alam, Jennifer Quantius, Breanne Mackenzie, Gianni Carraro, Alena Moiseenko, Cho-Ming Chao, Parviz Minoo, Werner Seeger, Saverio Bellusci (2013)
Development p. dev.099747-

Publications 2013

Exosomes from RBC units bind to monocytes and induce pro-inflammatory cytokines, boosting T cell responses in vitro
A. Danesh, H. C. Inglis, R. P. Jackman, S. Wu, X. Deng, M. O. Muench, J. W. Heitman, P. J. Norris (2013)
Blood p. blood-2013-10-530469-

Efficient generation of lung and airway epithelial cells from human pluripotent stem cells
Sarah X L Huang, Mohammad Naimul Islam, John O'Neill, Zheng Hu, Yong-Guang Yang, Ya-Wen Chen, Melanie Mumau, Michael D Green, Gordana Vunjak-Novakovic, Jahar Bhattacharya, Hans-Willem Snoeck (2013)
Nature biotechnology advance on

Opposite Adaptive Processing of Stimulus Intensity in Two Major Nuclei of the Somatosensory Brainstem
B. Mohar, Y. Katz, I. Lampl (2013)
Journal of Neuroscience    33 (39) p. 15394-15400

A Single Intravenous rAAV Injection as Late as P20 Achieves Efficacious and Sustained CNS Gene Therapy in Canavan Mice
Seemin Seher Ahmed, Huapeng Li, Chunyan Cao, Elif M Sikoglu, Andrew R Denninger, Qin Su, Samuel Eaton, Ana A Liso Navarro, Jun Xie, Sylvia Szucs, Hongwei Zhang, Constance Moore, Daniel A Kirschner, Thomas N Seyfried, Terence R Flotte, Reuben Matalon, Guangping Gao (2013)
Molecular therapy

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