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DM5500 B Automated Upright Microscope System for Life Science Research

Archived Product
Replaced by Leica DM4 B & DM6 B

Publications 2018

Atorvastatin attenuates paraquat poisoning-induced epithelial-mesenchymal transition via downregulating hypoxia-inducible factor-1 alpha
Du J, Zhu Y, Meng X, Xie H, Wang J, et. al.
Life Sciences
2018 vol: 213 pp: 126-133

Neural stem cell lineage-specific cannabinoid type-1 receptor regulates neurogenesis and plasticity in the adult mouse hippocampus
Zimmermann T, Maroso M, Beer A ,Baddenhausen S, Ludewig S, et. al.
Cerebral Cortex

Characterisation of Stramenopile-specific mastigoneme proteins in Phytophthora parasitica
Hee W, Blackman L, Hardham A
2018 pp: 1-15

Phenotyping Thermal Responses of Yeasts and Yeast-like Microorganisms at the Individual and Population Levels: Proof-of-Concept, Development and Application of an Experimental Framework to a Plant Pathogen
Boixel A, Delestre G, Legeay J, Chelle M, Suffert F
Microbial Ecology
2018 pp: 1-15

Three-Dimensional Retinal Organoids Facilitate the Investigation of Retinal Ganglion Cell Development, Organization and Neurite Outgrowth from Human Pluripotent Stem Cells
Fligor C, Langer K, Sridhar A, Ren Y, Shields P, et. al.
Scientific Reports
2018 vol: 8 (1) pp: 14520

Cylindrospermopsis raciborskii Virus and host: Genomic characterization and ecological relevance
Martin R, Moniruzzaman M, Mucci N, Willis A, Woodhouse J, et. al.
Environmental Microbiology

Fluorescent Reporter Mice for Nerve Guidance Conduit Assessment: A High-Throughput in vivo Model
Mohan S, Hernández I, Wang W, Yin K, Sundback C, et. al.
The Laryngoscope

Study of the first stages of laser-induced contamination
Gebrayel El Reaidy G, Wagner F, Faye D, Natoli J
Optical Engineering
2018 vol: 57 (12) pp: 1

Decellularised tissues obtained by a CO2-philic detergent and supercritical CO2
Antons J, Marascio M, Aeberhard P, Weissenberger G, Hirt-Burri N, et. al.
European Cells and Materials
2018 vol: 36 pp: 81-95

HOPX Defines Heterogeneity of Postnatal Subventricular Zone Neural Stem Cells
Zweifel S, Marcy G, Lo Guidice Q, Li D, Heinrich C, et. al.
Stem Cell Reports
2018 vol: 11 (3) pp: 770-783

Morphine regulates adult neurogenesis and contextual memory extinction via the PKCε/Prox1 pathway
Fan W, Wang H, Zhang Y, Loh H, Law P, et. al.
2018 vol: 141 pp: 126-138

Exercise-Induced Changes to the Macrophage Response in the Dorsal Root Ganglia Prevent Neuropathic Pain after Spinal Cord Injury
Chhaya S, Quiros-Molina D, Tamashiro-Orrego A, Houle J,Q Detloff M
Journal of Neurotrauma
2018 pp: neu.2018.5819

Memory B cells are reactivated in subcapsular proliferative foci of lymph nodes
Moran I, Nguyen A, Khoo W, Butt D, Bourne K, et. al.
Nature Communications
2018 vol: 9 (1) pp: 3372

PAK2 Haploinsufficiency Results in Synaptic Cytoskeleton Impairment and Autism-Related Behavior
Wang Y, Zeng C, Li J, Zhou Z, Ju X, et. al.
Cell reports
2018 vol: 24 (8) pp: 2029-2041

A Direct Comparison of IV and ICV Delivery Methods for Gene Replacement Therapy in a Mouse Model of SMARD1
Shababi M, Villalón E, Kaifer K, DeMarco V, Lorson C
Molecular therapy. Methods & clinical development
2018 vol: 10 pp: 348-360

Neurog3 misexpression unravels mouse pancreatic ductal cell plasticity
Vieira A, Vergoni B, Courtney M, Druelle N, Gjernes E, et. al.
2018 vol: 13 (8) pp: e0201536

Fluorescent Reporter Mice for Nerve Guidance Conduit Assessment: A High-Throughput in vivo Model
Mohan S, Hernández I, Wang W, Yin K, Sundback C, et. al.
The Laryngoscope

Centrifugation and decontamination procedures selectively impair recovery of important populations in Mycobacterium smegmatis
Kennedy J, Baron V, Hammond R, Sloan D, Gillespie S
2018 vol: 112 pp: 79-82

Characterization of a Synovial B Cell-Derived Recombinant Monoclonal Antibody Targeting Stromal Calreticulin in the Rheumatoid Joints
Corsiero E, Jagemann L, Perretti M, Pitzalis C, Bombardieri M
Journal of immunology (Baltimore, Md. : 1950)
2018 vol: 201 (5) pp: 1373-1381

In vitro characterization of neonatal, juvenile, and adult porcine islet oxygen demand, β-cell function, and transcriptomes
Smith K, Purvis W, Davis M, Min C, Cooksey A, et. al.
2018 pp: e12432

Remodeled cortical inhibition prevents motor seizures in generalized epilepsy
Jiang X, Lupien-Meilleur A, Tazerart S, Lachance M, Samarova E, et. al.
Annals of Neurology
2018 vol: 84 (3) pp: 436-451

Comparative iTRAQ proteomics revealed proteins associated with horn development in yak
Li M, Wu X, Guo X, Bao P, Ding X, et. al.
Proteome Science
2018 vol: 16 (1) pp: 14

Presenilin gene function and Notch signaling feedback regulation in the developing mouse lens
Azimi M, Le T, Brown N
2018 vol: 102 pp: 40-52

Requirements for Neurogenin2 during mouse postnatal retinal neurogenesis
Kowalchuk A, Maurer K, Shoja-Taheri F, Brown N
Developmental Biology
2018 vol: 442 (2) pp: 220-235

Motivation, Perception, and Chance Converge to Make a Binary Decision
Zhang S, Miner L, Boutros C, Rogulja D, Crickmore M
2018 vol: 99 (2) pp: 376-388.e6

Rbpj direct regulation of Atoh7 transcription in the embryonic mouse retina
Miesfeld J, Moon M, Riesenberg A, Contreras A, Kovall R, et. al.
Scientific Reports
2018 vol: 8 (1) pp: 10195

Pituitary Adenylate Cyclase-Activating Polypeptide-27 (PACAP-27) in the Thalamic Paraventricular Nucleus Is Stimulated by Ethanol Drinking
Gupta A, Gargiulo A, Curtis G, Badve P, Pandey S, et. al.
Alcoholism: Clinical and Experimental Research
2018 vol: 42 (9) pp: 1650-1660

Fiber density of collagen grafts impacts rabbit urethral regeneration
Larsson H, Vythilingam G, Pinnagoda K, Vardar E, Engelhardt E, et. al.
Scientific Reports
2018 vol: 8 (1) pp: 10057

Uterine glands coordinate on-time embryo implantation and impact endometrial decidualization for pregnancy success
Kelleher A, Milano-Foster J, Behura S, Spencer T
Nature communications
2018 vol: 9 (1) pp: 2435

Aldosterone infusion into the 4th ventricle produces sodium appetite with baroreflex attenuation independent of renal or blood pressure changes
Gasparini S, Melo M, Andrade-Franzé G, Geerling J, Menani J, et. al.
Brain Research
2018 vol: 1698 pp: 70-80

FGF signalling controls the specification of hair placode-derived SOX9 positive progenitors to Merkel cells
Nguyen M, Cohen I, Kumar V, Xu Z, Bar C, et. al.
Nature communications
2018 vol: 9 (1) pp: 2333

Persistent disruption of lateral junctional complexes and actin cytoskeleton in parotid salivary glands following radiation treatment
Wong W, Pier M, Limesand K
American Journal of Physiology-Regulatory, Integrative and Comparative Physiology
2018 vol: 315 (4) pp: R656-R667

Additive manufacturing of hierarchical injectable scaffolds for tissue engineering
Béduer A, Piacentini N, Aeberli L, Da Silva A, Verheyen C, et. al.
Acta Biomaterialia
2018 vol: 76 pp: 71-79

Immunohistochemical and Molecular Investigations Show Alteration in the Inflammatory Profile of Multiple System Atrophy Brain
Kiely A, Murray C, Foti S, Benson B, Courtney R, et. al.
Journal of Neuropathology & Experimental Neurology
2018 vol: 77 (7) pp: 598-607

Algorithm to identify circulating tumor cell clusters using in vivo flow cytometer
Pang K, Wei D, Hai P, Yang Z, Weng X, et. al.
Journal of Innovative Optical Health Sciences
2018 vol: 11 (05) pp: 1850024

Intestinal microbiota enhances pancreatic carcinogenesis in preclinical models
Thomas R, Gharaibeh R, Gauthier J, Beveridge M, Pope J, et. al.
2018 vol: 39 (8) pp: 1068-1078

Embryonic exposure to environmentally relevant concentrations of a brominated flame retardant reduces the size of song-control nuclei in a songbird
Eng M, Winter V, Elliott J, MacDougall-Shackleton S, Williams T
Developmental Neurobiology
2018 vol: 78 (8) pp: 799-806

Integral bHLH factor regulation of cell cycle exit and RGC differentiation
Maurer K, Kowalchuk A, Shoja-Taheri F, Brown N
Developmental Dynamics
2018 vol: 247 (8) pp: 965-975

Intrauterine growth restriction decreases NF-κB signaling in fetal pulmonary artery endothelial cells of fetal sheep
Dodson R, Powers K, Gien J, Rozance P, Seedorf G, et. al.
American Journal of Physiology-Lung Cellular and Molecular Physiology
2018 vol: 315 (3) pp: L348-L359

PRC1 Fine-tunes Gene Repression and Activation to Safeguard Skin Development and Stem Cell Specification
Cohen I, Zhao D, Bar C, Valdes V, Dauber-Decker K, et. al.
Cell Stem Cell
2018 vol: 22 (5) pp: 726-739.e7

aPKCζ-dependent Repression of Yap is Necessary for Functional Restoration of Irradiated Salivary Glands with IGF-1
Chibly A, Wong W, Pier M, Cheng H, Mu Y, et. al.
Scientific Reports
2018 vol: 8 (1) pp: 6347

Leaflet anatomy of the Dipterygeae clade (Faboideae: Fabaceae): evolutionary implications and systematics
Silva N, Do Carmo de Oliveira Arruda R, Alves F, Bagnatori Sartori Â
Botanical Journal of the Linnean Society
2018 vol: 187 (1) pp: 99-117

3D Printing of Thermo-Responsive Methylcellulose Hydrogels for Cell-Sheet Engineering
Cochis A, Bonetti L, Sorrentino R, Contessi Negrini N, Grassi F, et. al.
2018 vol: 11 (4) pp: 579

Preparation of superhydrophobic-oleophilic quartz sand filter and its application in oil-water separation
Liu P, Niu L, Tao X, Li X, Zhang Z, et. al.
Applied Surface Science
2018 vol: 447 pp: 656-663

Noninvasive monitoring of nanoparticle clearance and aggregation in blood circulation by in vivo flow cytometry
Wei D, Pang K, Song Q, Suo Y, He H, et. al.
Journal of Controlled Release
2018 vol: 278 pp: 66-73

Two lncRNAs Expression Profiles in Salt Stressed Barley (Hordeum vulgare L.) Roots
Karlik E, Marakli S, Gozukirmizi N
2018 vol: 83 (1) pp: 37-43

Porous Se@SiO2 nanocomposites protect the femoral head from methylprednisolone-induced osteonecrosis
Deng G, Dai C, Chen J, Ji A, Zhao J, et. al.
International journal of nanomedicine
2018 vol: 13 pp: 1809-1818

Retinal Ganglion Cell Diversity and Subtype Specification from Human Pluripotent Stem Cells
Langer K, Ohlemacher S, Phillips M, Fligor C, Jiang P, et. al.
Stem Cell Reports
2018 vol: 10 (4) pp: 1282-1293

Deregulation of ATG9A by impaired AR signaling induces autophagy in prostate stromal fibroblasts and promotes BPH progression
Jiang C, Yang B, Zhao S, Shao S, Bei X, et. al.
Cell Death & Disease
2018 vol: 9 (4) pp: 431

Neonatal exposure to hyperoxia leads to persistent disturbances in pulmonary histone signatures associated with NOS3 and STAT3 in a mouse model
Chao C, van den Bruck R, Lork S, Merkle J, Krampen L, et. al.
Clinical Epigenetics
2018 vol: 10 (1) pp: 37

The epicardium obscures interpretations on endothelial-to-mesenchymal transition in the mouse atrioventricular canal explant assay
Criem N, Zwijsen A
Scientific Reports
2018 vol: 8 (1) pp: 4722

NRG1-Fc improves metabolic health via dual hepatic and central action
Zhang P, Kuang H, He Y, Idiga S, Li S, et. al.
JCI Insight
2018 vol: 3 (5)

Widespread transduction of astrocytes and neurons in the mouse central nervous system after systemic delivery of a self-complementary AAV-PHP.B vector
Rincon M, de Vin F, Duqué S, Fripont S, Castaldo S, et. al.
Gene Therapy
2018 vol: 25 (2) pp: 83-92

Absence of Claudin 11 in CNS Myelin Perturbs Behavior and Neurotransmitter Levels in Mice
Maheras K, Peppi M, Ghoddoussi F, Galloway M, Perrine S, et. al.
Scientific Reports
2018 vol: 8 (1) pp: 3798

Technical note: Method for isolation of the bovine sweat gland and conditions for in vitro culture
Hamzaoui S, Burger C, Collier J, Collier R
Journal of Dairy Science
2018 vol: 101 (5) pp: 4638-4642

When the BRANCHED network bears fruit: How carpic dominance causes fruit dimorphism in Aethionema
Lenser T, Tarkowská D, Novák O, Wilhelmsson P, Bennett T, et. al.
The Plant Journal

Incorporation of a skeletal muscle-specific enhancer in the regulatory region of Igf1 upregulates IGF1 expression and induces skeletal muscle hypertrophy
Zou Y, Dong Y, Meng Q, Zhao Y, Li N
Scientific Reports
2018 vol: 8 (1) pp: 2781

Comparison of partially and fully chemically-modified siRNA in conjugate-mediated delivery in vivo
Hassler M, Turanov A, Alterman J, Haraszti R, Coles A, et. al.
Nucleic Acids Research

Nef Secretion into Extracellular Vesicles or Exosomes Is Conserved across Human and Simian Immunodeficiency Viruses
McNamara R, Costantini L, Myers T, Schouest B, Maness N, et. al.
2018 vol: 9 (1) pp: e02344-17

Steroid-associated osteonecrosis animal model in rats
Zheng L, Wang J, Kong L, Huang L, Tian L, et. al.
Journal of Orthopaedic Translation

Autologous cell therapy approach for Duchenne muscular dystrophy using PiggyBac transposons and mesoangioblasts
Iyer P, Mavoungou L, Ronzoni F, Zemla J, Schmid-Siegert E, et. al.
Molecular Therapy

Developmental dynamics of gene expression and alternative polyadenylation in the Caenorhabditis elegans germline
West S, Mecenas D, Gutwein M, Aristizábal-Corrales D, Piano F, et. al.
Genome Biology
2018 vol: 19 (1) pp: 8

BioID Reveals Novel Proteins of the Plasmodium Parasitophorous Vacuole Membrane
Schnider C, Bausch-Fluck D, Brühlmann F, Heussler V, Burda P
2018 vol: 3 (1) pp: e00522-17

microRNA-219 Reduces Viral Load and Pathologic Changes in Theiler's Virus-Induced Demyelinating Disease
Moyano A, Steplowski J, Wang H, Son K, Rapolti D, et. al.
Molecular therapy : the journal of the American Society of Gene Therapy

Impact of cycling cells and cell cycle regulation on Hydra regeneration
Buzgariu W, Wenger Y, Tcaciuc N, Catunda-Lemos A, Galliot B
Developmental Biology
2018 vol: 433 (2) pp: 240-253

Neuronal delivery of Hedgehog directs spatial patterning of taste organ regeneration
Lu W, Mann R, Nguyen A, Bi T, Silverstein M, et. al.
Proceedings of the National Academy of Sciences of the United States of America
2018 vol: 115 (2) pp: E200-E209

The dynamics of native Atoh7 protein expression during mouse retinal histogenesis, revealed with a new antibody
Miesfeld J, Glaser T, Brown N
Gene Expression Patterns
2018 vol: 27 pp: 114-121

Mouse models of two missense mutations in actin-binding domain 1 of dystrophin associated with Duchenne or Becker muscular dystrophy
McCourt J, Talsness D, Lindsay A, Arpke R, Chatterton P, et. al.
Human Molecular Genetics
2018 vol: 27 (3) pp: 451-462

Pseudomyogenic hemangioendothelioma of skin, bone and soft tissue—a clinicopathological, immunohistochemical, and fluorescence in situ hybridization study
Pradhan D, Schoedel K, McGough R, Ranganathan S, Rao U
Human Pathology
2018 vol: 71 pp: 126-134

Evaluation of protein phosphorylation in bull sperm during their maturation in the epididymis
Jankovičová J, Michalková K, Sečová P, Horovská Ľ, Maňásková-Postlerová P, et. al.
Cell and Tissue Research
2018 vol: 371 (2) pp: 365-373

Status epilepticus triggers long-lasting activation of complement C1q-C3 signaling in the hippocampus that correlates with seizure frequency in experimental epilepsy
Schartz N, Wyatt-Johnson S, Price L, Colin S, Brewster A
Neurobiology of Disease
2018 vol: 109 pp: 163-173

Stable pH responsive layer-by-layer assemblies of partially hydrolysed poly(2-ethyl-2-oxazoline) and poly(acrylic acid) for effective prevention of protein, cell and bacteria surface attachment
He T, Jańczewski D, Guo S, Man S, Jiang S, et. al.
Colloids and Surfaces B: Biointerfaces
2018 vol: 161 pp: 269-278

Cyclic Peptides to Improve Delivery and Exon Skipping of Antisense Oligonucleotides in a Mouse Model for Duchenne Muscular Dystrophy
Jirka S, 't Hoen P, Diaz Parillas V, Tanganyika-de Winter C, Verheul R, et. al.
Molecular therapy : the journal of the American Society of Gene Therapy
2018 vol: 26 (1) pp: 132-147

A novel bone targeting delivery system carrying phytomolecule icaritin for prevention of steroid-associated osteonecrosis in rats
Chen S, Zheng L, Zhang J, Wu H, Wang N, et. al.
2018 vol: 106 pp: 52-60

Surgical techniques influence local environment of injured spinal cord and cause various grafted cell survival and integration
Hou S, Saltos T, Iredia I, Tom V
Journal of Neuroscience Methods
2018 vol: 293 pp: 144-150

Evaluation of Clonostachys rosea for Control of Plant-Parasitic Nematodes in Soil and in Roots of Carrot and Wheat
Iqbal M, Dubey M, McEwan K, Menzel U, Franko M, et. al.
2018 vol: 108 (1) pp: 52-59

Publications 2017

CCR6 Defines Memory B Cell Precursors in Mouse and Human Germinal Centers, Revealing Light-Zone Location and Predominant Low Antigen Affinity
Suan D, Kräutler N, Maag J, Butt D, Bourne K, et. al.
2017 vol: 47 (6) pp: 1142-1153.e4

Cryptic species in the mountaintops: species delimitation and taxonomy of the Bembidion breve species group (Coleoptera: Carabidae) aided by genomic architecture of a century-old type specimen
Sproul J, Maddison D
Zoological Journal of the Linnean Society

Chronic cuffing of cervical vagus nerve inhibits efferent fiber integrity in rat model
Somann J, Albors G, Neihouser K, Lu K, Liu Z, et. al.
Journal of Neural Engineering

Major depletion of SOX2+ stem cells in the adult pituitary is not restored which does not affect hormonal cell homeostasis and remodelling
Roose H, Cox B, Boretto M, Gysemans C, Vennekens A, et. al.
Scientific Reports
2017 vol: 7 (1) pp: 16940

Structural properties of starch-chitosan-gelatin foams and the impact of gelatin on MC3T3 mouse osteoblast cell viability
Risser G, Banik B, Brown J, Catchmark J
Journal of Biological Engineering
2017 vol: 11 (1) pp: 43

Asprosin is a centrally acting orexigenic hormone
Duerrschmid C, He Y, Wang C, Li C, Bournat J, et. al.
Nature Medicine
2017 vol: 23 (12) pp: 1444-1453

Modulating the catalytic activity of AMPK has neuroprotective effects against α-synuclein toxicity
Bobela W, Nazeeruddin S, Knott G, Aebischer P, Schneider B
Molecular Neurodegeneration
2017 vol: 12 (1) pp: 80

Identification and Validation of a PD-L1 Binding Peptide for Determination of PDL1 Expression in Tumors
Caldwell C, Johnson C, Balaji V, Balaji G, Hammer R, et. al.
Scientific reports
2017 vol: 7 (1) pp: 13682

Silver-doped keratin nanofibers preserve a titanium surface from biofilm contamination and favor soft-tissue healing
Cochis A, Ferraris S, Sorrentino R, Azzimonti B, Novara C, et. al.
Journal of Materials Chemistry B
2017 vol: 5 (42) pp: 8366-8377

The polymorphism L204F affects transport and membrane expression of the sodium-dependent organic anion transporter SOAT (SLC10A6)
Bakhaus K, Fietz D, Kliesch S, Weidner W, Bergmann M, et. al.
The Journal of Steroid Biochemistry and Molecular Biology

Prevention of C5aR1 signaling delays microglial inflammatory polarization, favors clearance pathways and suppresses cognitive loss
Hernandez M, Jiang S, Cole T, Chu S, Fonseca M, et. al.
Molecular Neurodegeneration
2017 vol: 12 (1) pp: 66

Rare genetic variants in the sodium-dependent organic anion transporter SOAT (SLC10A6): Effects on transport function and membrane expression
Bennien J, Fischer T, Geyer J
The Journal of Steroid Biochemistry and Molecular Biology

Interspecific Hybridization Processes between Michelia yunnanensis and M. crassipes and Embryogenesis of the Heterozygote
Xu H, Li F, Pan Y, Gong X
2017 vol: 52 (8) pp: 1043-1047

KIF5B-RET Oncoprotein Signals through a Multi-kinase Signaling Hub
Das T, Cagan R
Cell Reports
2017 vol: 20 (10) pp: 2368-2383

A Plasmodium plasma membrane reporter reveals membrane dynamics by live-cell microscopy
Burda P, Schaffner M, Kaiser G, Roques M, Zuber B, et. al.
Scientific reports
2017 vol: 7 (1) pp: 9740

Temporal effect of manipulating NeuroD1 expression with the synthetic small molecule KHS101 on morphine contextual memory
Zhang Y, Kibaly C, Xu C, Loh H, Law P

Src‐dependent phosphorylation of μ‐opioid receptor at Tyr336 modulates opiate withdrawal
Zhang L, Kibaly C, Wang Y, et. al.
EMBO Molecular Medicine
2017 pp: e201607324

LC3A Silencing Hinders Aggresome Vimentin Cage Clearance in Primary Choroid Plexus Carcinoma
Nassar M, Samaha H, Ghabriel M, Yehia M, Taha H, et. al.
Scientific reports
2017 vol: 7 (1) pp: 8022

The selective antifungal activity of Drosophila melanogaster metchnikowin reflects the species-dependent inhibition of succinate-coenzyme Q reductase
Moghaddam M, Gross T, Becker A, Vilcinskas A, Rahnamaeian M
Scientific reports
2017 vol: 7 (1) pp: 8192

T cell protein tyrosine phosphatase prevents STAT1 induction of claudin-2 expression in intestinal epithelial cells
Krishnan M, McCole D
Annals of the New York Academy of Sciences

Dietary-Induced Signals That Activate the Gonadal Longevity Pathway during Development Regulate a Proteostasis Switch in Caenorhabditis elegans Adulthood
Shemesh N, Meshnik L, Shpigel N, Ben-Zvi A
Frontiers in Molecular Neuroscience
2017 vol: 10 pp: 254

Marked stem/progenitor cell expansion occurs early after murine ileostomy: a new model
Fowler K, Wieck M, Hilton A, Hou X, Schlieve C, et. al.
Journal of Surgical Research
2017 vol: 220 pp: 182-196

Sodium-dependent organic anion transporter (Slc10a6/) knockout mice show normal spermatogenesis and reproduction, but elevated serum levels for cholesterol sulfate
Bakhaus K, Bennien J, Fietz D, Sánchez-Guijo A, Hartmann M, et. al.
The Journal of Steroid Biochemistry and Molecular Biology

Effect of Brain Tumor Presence During Radiation on Tissue Toxicity: Transcriptomic and Metabolic Changes
Zawaski J, Sabek O, Voicu H, Eastwood Leung H, Gaber M
International Journal of Radiation Oncology*Biology*Physics

Genome-wide screen for genes involved in eDNA release during biofilm formation by Staphylococcus aureus
DeFrancesco A, Masloboeva N, Syed A, DeLoughery A, Bradshaw N, et. al.
Proceedings of the National Academy of Sciences of the United States of America
2017 vol: 114 (29) pp: E5969-E5978

Inhibition of IκB Kinase at 24 Hours After Acute Kidney Injury Improves Recovery of Renal Function and Attenuates Fibrosis
Johnson F, Patel N, Purvis G, Chiazza F, Chen J, et. al.
Journal of the American Heart Association
2017 vol: 6 (7)

Proteasomal activity-based probes mark protein homeostasis in muscles
Raz V, Raz Y, Paniagua-Soriano G, Roorda J, Olie C, et. al.
Journal of Cachexia, Sarcopenia and Muscle

3D Near-Field Electrospinning of Biomaterial Microfibers with Potential for Blended Microfiber-Cell-Loaded Gel Composite Structures
Fattahi P, Dover J, Brown J
Advanced Healthcare Materials
2017 pp: 1700456

Phosphosite charge rather than shootward localization determines OCTOPUS activity in root protophloem
Breda A, Hazak O, Hardtke C
Proceedings of the National Academy of Sciences of the United States of America
2017 vol: 114 (28) pp: E5721-E5730

A mutant of Chlamydomonas without LHCSR maintains high rates of photosynthesis, but has reduced cell division rates in sinusoidal light conditions
Cantrell M, Peers G, Hankamer B, Umen J, Rappaport F, et. al.
2017 vol: 12 (6) pp: e0179395

Tissue alignment enhances remodeling potential of tendon-derived cells - Lessons from a novel microtissue model of tendon scarring
Foolen J, Wunderli S, Loerakker S, Snedeker J
Matrix Biology

Cellular retinoic acid binding protein 1 modulates stem cell proliferation to affect learning and memory in male mice
Lin Y, Persaud S, Nhieu J, Wei L

Measuring CO2 and HCO3− permeabilities of isolated chloroplasts using a MIMS-18O approach
Tolleter D, Chochois V, Poiré R, Price G, Badger M
Journal of Experimental Botany
2017 vol: 34 pp: 303-310

Osteocyte Regulation of Receptor Activator of NF-κB Ligand/Osteoprotegerin in a Sheep Model of Osteoporosis
El Khassawna T, Merboth F, Malhan D, Böcker W, Daghma D, et. al.
The American Journal of Pathology
2017 vol: 187 (8) pp: 1686-1699

Enhanced classical complement pathway activation and altered phagocytosis signaling molecules in human epilepsy
Wyatt S, Witt T, Barbaro N, Cohen-Gadol A, Brewster A
Experimental Neurology
2017 vol: 295 pp: 184-193

Heterogeneous Cadherin Expression and Multicellular Aggregate Dynamics in Ovarian Cancer Dissemination
Klymenko Y, Johnson J, Bos B, Lombard R, Campbell L, et. al.
2017 vol: 19 (7) pp: 549-563

Electroacupuncture at Fengchi (GB20) inhibits calcitonin gene-related peptide expression in the trigeminovascular system of a rat model of migraine
Zhao L, Liu L, Pei P, Qu Z, Zhu Y, et. al.
Neural regeneration research
2017 vol: 12 (5) pp: 804-811

Repurposing the anti-epileptic drug sodium valproate as an adjuvant treatment for diffuse intrinsic pontine glioma
Killick-Cole C, Singleton W, Bienemann A, Asby D, Wyatt M, et. al.
2017 vol: 12 (5) pp: e0176855

The Tomato Kinase Pti1 Contributes to Production of Reactive Oxygen Species in Response to Two Flagellin-Derived Peptides and Promotes Resistance to Pseudomonas syringae Infection
Schwizer S, Kraus C, Dunham D, Zheng Y, Fernandez-Pozo N, et. al.
Molecular Plant-Microbe Interactions
2017 vol: 30 (9) pp: 725-738

Prenatal exposure to di-n-butyl phthalate disrupts the development of adult Leydig cells in male rats during puberty
Chen X, Li L, Li H, Guan H, Dong Y, et. al.
2017 vol: 386 pp: 19-27

Rod Outer Segment Development Influences AAV-Mediated Photoreceptor Transduction After Subretinal Injection
Petit L, Ma S, Cheng S, Gao G, Punzo C
Human Gene Therapy
2017 vol: 28 (6) pp: 464-481

Possible involvement of the lipoxygenase and leukotriene signaling pathways in cisplatin-mediated renal toxicity
Alkhamees O, Alroujayee A, Abuohashish H, Alrojayee F, Ahmed M
Cancer Chemotherapy and Pharmacology
2017 vol: 80 (1) pp: 55-64

A Molecular Mechanism To Switch the Aryl Hydrocarbon Receptor from a Transcription Factor to an E3 Ubiquitin Ligase
Luecke-Johansson S, Gralla M, Rundqvist H, Ho J, Johnson R, et. al.
Molecular and cellular biology
2017 vol: 37 (13) pp: MCB.00630-16

Increased oxidative stress and cytokinesis-block micronucleus cytome assay parameters in pregnant women with gestational diabetes mellitus and gestational arterial hypertension
Toljic M, Egic A, Munjas J, Karadzov Orlic N, Milovanovic Z, et. al.
Reproductive Toxicology
2017 vol: 71 pp: 55-62

Co-culturing epidermal keratinocytes and dermal fibroblasts on nano-structured titanium surfaces
Tan J, Zhao C, Zhou J, Duan K, Wang J, et. al.
Materials Science and Engineering: C
2017 vol: 78 pp: 288-295

Growing evidence for facultative biotrophy in saprotrophic fungi: data from microcosm tests with 201 species of wood-decay basidiomycetes
Smith G, Finlay R, Stenlid J, Vasaitis R, Menkis A
New Phytologist
2017 vol: 215 (2) pp: 747-755

Single-molecule sequencing resolves the detailed structure of complex satellite DNA loci in Drosophila melanogaster
Khost D, Eickbush D, Larracuente A
Genome research
2017 vol: 27 (5) pp: 709-721

Mapping cell behavior across a wide range of vertical silicon nanocolumn densities
Buch-Månson N, Kang D, Kim D, Lee K, Yoon M, et. al.
2017 vol: 9 (17) pp: 5517-5527

Odomas linnavuorii, a new ground-dwelling leafhopper species from West Africa, with a nomenclatural note on the genus Coronophtus Van Stalle (Hemiptera: Auchenorrhyncha: Cicadellidae: Megophthalminae)
Malenovský I, Webb M
Entomologica Americana
2017 vol: 122 (3) pp: 418-434

Bioreactor mechanically guided 3D mesenchymal stem cell chondrogenesis using a biocompatible novel thermo-reversible methylcellulose-based hydrogel
Cochis A, Grad S, Stoddart M, et. al.
Scientific Reports
2017 vol: 7 pp: 45018

Liver histology and histomorphometry in hybrid sorubim (Pseudoplatystoma reticulatum × Pseudoplatystoma corruscans) reared on intensive fish farming
Rodrigues R, Saturnino K, Fernandes C
Aquaculture Research
2017 vol: 48 (9) pp: 5083-5093

Genomic changes following the reversal of a Y chromosome to an autosome in Drosophila pseudoobscura
Chang C, Larracuente A
2017 vol: 71 (5) pp: 1285-1296

Regulatory T cells promote myelin regeneration in the central nervous system
Dombrowski Y, O'Hagan T, Dittmer M, et. al.
Nature Neuroscience
2017 vol: 20 (5) pp: 674-680

The AtMYB12 activation domain maps to a short C-terminal region of the transcription factor
Stracke R, Turgut-Kara N, Weisshaar B
Zeitschrift für Naturforschung C
2017 vol: 72 (7-8)

Plastin-3 extends survival and reduces severity in mouse models of spinal muscular atrophy
Stark D, Karvas R, Siegel A, Cornelison D, Pintel D, et. al.
2017 vol: 138 (24) pp: 5279-5289

The Chromosomes of Phlugis proxima Bruner (Orthoptera, Tettigoniidae) and Discussion on Chromosomal Patterns in Meconematinae
Araujo D, Chamorro-Rengifo J, Mello R
Entomological News
2017 vol: 126 (4) pp: 281-289

Leaf morphoanatomy of Araujia and Morrenia (Asclepiadoideae, Apocynaceae): phylogenetic implications and species key
Carvalho R, Pellissari L, Pace M, Scremin-Dias E, De Oliveira Arruda R, et. al.
Botanical Journal of the Linnean Society
2017 vol: 183 (2) pp: 280-293

Bioactive glasses functionalized with polyphenols: in vitro interactions with healthy and cancerous osteoblast cells
Cazzola M, Vernè E, Cochis A, Sorrentino R, Azzimonti B, et. al.
Journal of Materials Science
2017 pp: 1-13

Occurrence fungi causing black foot on young grapevines and nursery rootstock plants in Italy
Phytopathologia Mediterranea

The Kölliker–Fuse nucleus acts as a timekeeper for late-expiratory abdominal activity
Jenkin S, Milsom W, Zoccal D

Fluid shear stress-induced TGF-β/ALK5 signaling in renal epithelial cells is modulated by MEK1/2
Kunnen S, Leonhard W, Semeins C, Hawinkels L, et. al.
Cellular and Molecular Life Sciences
2017 pp: 1-16

Light-sheet fluorescence imaging to localize cardiac lineage and protein distribution
Ding Y, Lee J, Ma J, Sung K, Yokota T, Singh N, et. al.
Scientific Reports
2017 vol: 7 pp: 42209

Identification of cyst nematode B-type CLE peptides and modulation of the vascular stem cell pathway for feeding cell formation
Guo X, Wang J, Gardner M, Fukuda H, Kondo Y, Etchells J, Wang X, Mitchum M
PLOS Pathogens
2017 vol: 13 (2) pp: e1006142

Hypothyroidism in utero stimulates pancreatic beta cell proliferation and hyperinsulinaemia in the ovine fetus during late gestation
Harris S, De Blasio M, Davis M, Kelly A, Davenport H, Wooding F, Blache D, Meredith D, Anderson M, Fowden A, Limesand S, Forhead A
The Journal of Physiology

Alphonsea glandulosa (Annonaceae), a New Species from Yunnan, China
Xue B, Shao Y, Saunders R, Tan Y
2017 vol: 12 (2) pp: e0170107

Endogenous RNAi Pathways Are Required in Neurons for Dauer Formation in Caenorhabditis elegans
Bharadwaj P, Hall S

In situ activation of platelets with checkpoint inhibitors for post-surgical cancer immunotherapy
Wang C, Sun W, Ye Y, Hu Q, Bomba H, Gu Z
Nature Biomedical Engineering
2017 vol: 1 (2) pp: 0011

Short bowel syndrome results in increased gene expression associated with proliferation, inflammation, bile acid synthesis and immune system activation: RNA sequencing a zebrafish SBS model
Schall K, Thornton M, Isani M, Holoyda K, Hou X, Lien C, Grubbs B, Grikscheit T
BMC Genomics
2017 vol: 18 (1) pp: 23

Meiotic Consequences of Genetic Divergence Across the Murine Pseudoautosomal Region
Dumont B

CD6 Receptor Regulates Intestinal Ischemia/Reperfusion-induced Injury by Modulating Natural IgM-producing B1a Cell Self-renewal
Enyindah-Asonye G, Li Y, Xin W, Singer N, Gupta N, Fung J, Lin F
The Journal of biological chemistry
2017 vol: 292 (2) pp: 661-671

Expression of transcription factors divide retinal ganglion cells into distinct classes
Sweeney N, James K, Nistorica A, Lorig-Roach R, Feldheim D
Journal of Comparative Neurology

Root xylem plasticity to improve water use and yield in water-stressed soybean
Prince S, Murphy M, Mutava R, Durnell L, Valliyodan B, Grover Shannon J, Nguyen H
Journal of Experimental Botany
2017 pp: erw472

A Fully Synthetic Transcriptional Platform for a Multicellular Eukaryote
Crocker J, Tsai A, Stern D
Cell Reports
2017 vol: 18 (1) pp: 287-296

A Differentiation Transcription Factor Establishes Muscle-Specific Proteostasis in Caenorhabditis elegans
Bar-Lavan Y, Shemesh N, Dror S, Ofir R, Yeger-Lotem E, et. al.
PLOS Genetics
2016 vol: 12 (12) pp: e1006531

Extreme drought event in AD 1637-1643 in North China: New insight from pollen records in Kaifeng City
Liu D, Ma J, Gu L, Chen Y
Climate of the Past Discussions
2016 pp: 1-17

Circulating Zonulin Correlates with Density of Enteroviruses and Tolerogenic Dendritic Cells in the Small Bowel Mucosa of Celiac Disease Patients
Vorobjova T, Raikkerus H, Kadaja L, Talja I, Uibo O, et. al.
Digestive Diseases and Sciences
2017 vol: 62 (2) pp: 358-371

DNA damage, repair monitoring and epigenetic DNA methylation changes in seedlings of Chernobyl soybeans
Georgieva M, Rashydov N, Hajduch M
DNA Repair
2017 vol: 50 pp: 14-21

Leveraging an NQO1 Bioactivatable Drug for Tumor-Selective Use of Poly(ADP-ribose) Polymerase Inhibitors
Huang X, Motea E, Moore Z, Yao J, Dong Y, et. al.
Cancer Cell
2016 vol: 30 (6) pp: 940-952

Salsalate treatment following traumatic brain injury reduces inflammation and promotes a neuroprotective and neurogenic transcriptional response with concomitant functional recovery
Lagraoui M, Sukumar G, Latoche J, Maynard S, Dalgard C, et. al.
Brain, Behavior, and Immunity
2017 vol: 61 pp: 96-109

CD6 Receptor Regulates Intestinal Ischemia/Reperfusion-induced Injury by Modulating Natural IgM-producing B1a Cell Self-renewal.
Enyindah-Asonye G, Li Y, Xin W, Singer N, Gupta N, et. al.
The Journal of biological chemistry
2017 vol: 292 (2) pp: 661-671

Dose Dependent Dual Effect of Baicalin and Herb Huang Qin Extract on Angiogenesis
Zhu D, Wang S, Lawless J, He J, Zheng Z
2016 vol: 11 (11) pp: e0167125

Insulin-Like Growth Factor-1–Mediated DNA Repair in Irradiated Salivary Glands Is Sirtuin-1 Dependent
Meyer S, Chibly A, Burd R, Limesand K
Journal of Dental Research
2017 vol: 96 (2) pp: 225-232

Publications 2016

Cotyledon Wounding of Arabidopsis Seedlings
Gasperini D, Acosta I, Farmer E
2016 vol: 6 (2)

Cotyledon Wounding of Arabidopsis Seedlings
Gasperini D, Acosta I, Farmer E
2016 vol: 6 (2)

Nano-topographic titanium modulates macrophage response in vitro and in an implant-associated rat infection model
Tan J, Zhao C, Wang Y, Li Y, Duan K, et. al.
RSC Adv.
2016 vol: 6 (113) pp: 111919-111927

Mitochondrial growth during the cell cycle of Trypanosoma brucei bloodstream forms
Jakob M, Hoffmann A, Amodeo S, Peitsch C, Zuber B, et. al.
Scientific Reports
2016 vol: 6 pp: 36565

Eight novel Bipolaris species identified from John L. Alcorn’s collections at the Queensland Plant Pathology Herbarium (BRIP)
Tan Y, Crous P, Shivas R
Mycological Progress
2016 vol: 15 (10-11) pp: 1203-1214

A Small Potassium Current in AgRP/NPY Neurons Regulates Feeding Behavior and Energy Metabolism
He Y, Shu G, Yang Y, Xu P, Xia Y, et. al.
Cell Reports
2016 vol: 17 (7) pp: 1807-1818

Taxonomic review of New World Tachyina (Coleoptera, Carabidae): descriptions of new genera, subgenera, and species, with an updated key to the subtribe in the Americas
Boyd O, Erwin T
2016 vol: 626 pp: 87-123

Morphological and Molecular Characterization of Gracilacus wuae n. sp. (Nematoda: Criconematoidea) Associated with Cow Parsnip (Heracleum maximum) in Ontario, Canada
Yu Q, Ye W, Powers T
Journal of nematology
2016 vol: 48 (3) pp: 203-213

Design and production of antibodies for the detection of Streptococcus uberis
Mihklepp K, Kivirand K, Nikopensius M, Peedel D, Utt M, et. al.
Enzyme and Microbial Technology
2017 vol: 96 pp: 135-142

Chronic stress leads to epigenetic dysregulation of neuropeptide-Y and cannabinoid CB1 receptor in the mouse cingulate cortex
Lomazzo E, König F, Abassi L, Jelinek R, Lutz B

Bucrates lanista Rehn 1918 (Tettigoniidae: Conocephalinae): The First Record from the Brazilian Pantanal, the First Description of the Male, the First Karyotypic Report for the Genus, and the First Telomeric Hybridization of the Subfamily
Chamorro-Rengifo J, Olivier R, Araujo D
Zoological Science
2016 vol: 33 (5) pp: 537-544

Protein targeting to glycogen is a master regulator of glycogen synthesis in astrocytes
Ruchti E, Roach P, DePaoli-Roach A, Magistretti P, Allaman I
IBRO Reports
2016 vol: 1 pp: 46-53

Mutant Analysis by Rescue Gene Excision: New tools for mosaic studies in Drosophila
Zhou Q, Neal S, Pignoni F

Genomic and functional analysis of the host response to acute simian varicella infection in the lung
Arnold N, Girke T, Sureshchandra S, Nguyen C, Rais M, et. al.
Scientific Reports
2016 vol: 6 pp: 34164

Distinct regulation of atonal in a visual organ of Drosophila: organ-specific enhancer and lack of autoregulation in the larval eye
Zhou Q, Yu L, Friedrich M, Pignoni F
Developmental Biology

Acute simian varicella infection causes robust and sustained changes in gene expression in the sensory ganglia
Arnold N, Girke T, Sureshchandra S, Messaoudi I
Journal of virology
2016 pp: JVI.01272-16

Root assays to study pattern-triggered immunity in plant-nematode interactions
Tran T, Chen S, Wang X
European Journal of Plant Pathology
2016 pp: 1-7

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